Genomics of Plant-Associated Microbes

Resources on Genomics of Plant-Associated Microbes

Bacteria; Proteobacteria

Alpha subdivision; Rhizobiaceae group
- Sinorhizobium meliloti
- Bradyrhizobium japonicum
- Mesorhizobium loti (Rhizobase)
- Mesorhizobium loti (NCBI)
- Rhizobium sp. strain NGR234
Beta subdivision; Ralstonia group
- Ralstonia solanacearum strain GMI1000
Gamma subdivision; Xanthomonas group
Gamma subdivision; Pseudomonadaceae
- Pseudomonas syringae pv. tomato DC3000
- Pseudomonas aeruginosa PA01 (pseudomonas.com)
- Pseudomonas aeruginosa PA01 (NCBI)
- Pseudomonas fluorescens

Bacteria; Firmicutes

Actinobacteria
- Leifsonia xyli subsp. xyli
Bacillus/Staphylococcus group
- Bacillus subtilis strain 168 (SubtiList)
- Bacillus subtilis strain 168 (NCBI)
Mollicutes
- Spiroplasma kunkelii strain NM2 (Ohio State)
- Spiroplasma kunkelii strain CR2 (Univ of Oklahoma)

Eukaryota

Fungi; Ascomycota; Pezizomycotina
- Magnaporthe grisea
- Leptosphaeria maculans (Genoscope)
- Leptosphaeria maculans (Univ Melbourne)
- Botrytis cinerea (Botryotinia fuckeliana)
- Blumeria (Erysiphe) graminis
Fungi; Ascomycota; mitosporic Ascomycota
- Fusarium sporotrichioides
- Fusarium graminearum
Fungi; Zygomycota
- Glomus spp. (Medicago truncatula Consortium)
- Glomus intraradices (NCBI dBEST)
- Glomus versiforme mixed ESTs (NCBI dBEST)
Stramenopiles; Oomycetes
- Phytophthora infestans
- Phytophthora sojae

Other useful links

Agricultural Microbes Genome Conference

Kamoun, S, Hogenhout, SA . 2001. Agricultural Microbes Genome 2. First glimpses into the genomes of plant-associated microbes. Plant Cell, 13:451-458.

Walton, JD. Genomes of Plant Associated Microbes, Part II: Fungi and Oomycetes. IS-MPMI Reporter, April 2001

Walton, JD. Plant-Associated Microbes Enter the Genomics Age. IS-MPMI Reporter, December 2000

Pierson, LS and Ishimaru, CA. Genomics of Plant-Associated Bacteria: A Glimpse of the Future That Has Become Reality. APSnet Feature, August 2000

Last modified: April 30, 2001

Sophien Kamoun and Saskia Hogenhout

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